Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820577.1_cds_XP_016500456.1_14283
CDS Infomation

[gene=LOC107818897] [db_xref=GeneID:107818897] [protein=scarecrow-like protein 3] [protein_id=XP_016500456.1] [location=77004..78416] [gbkey=CDS]
Sequence

ATGTTACAAGATGATGGTTCATCATCAGTGACCTCATCATCACCTCTTCAAAACTTTCCA
ATGACGTCACTTTCACCTAGTTTGAATTCACCATACCATTGGCTCAAGGAGCTGAAATCT
GAGGAAAGAGGTTTATATCTAATTCACCTTTTGCTCACTTGTGCTAACCATGTGGCTGCT
GGCAATCTTGAGAATGCTAACATTGCACTTGACCAAATCTCCCAATTAGCTTCTCCTAAA
GGAGATACAATGCAGCGAATCGCCTCGTATTTCGCTGAGGCGCTTGCTGATAGGATTCTG
AGATCTTGGCCTGGTATTTATAAGGCCTTGCATTCGACTAAGCTATCGATCGTATCAGAA
GATATACTGGTCAAGAAAATGTTTTTTGAGTATTTTCCGTTCTTGAAAGTAGCTTCTTTG
ATCACAAATCAAGCGATCATCGAAGCTATGGAAGGAGAAAAAATGGTTCATATTGTTGAT
CTCAATGCTTCTGAACCCCTTCAGTGGCGTGCGCTGCTTCAGGATTTGAGAGCGCGCCCT
GAAGGACCGCCCCATTTGCGGATTACGGGGGTTCATCAGCAAAAGGAAGTGTTAGAGCAA
ATAGCACATGTTCTAACAGAAGAAGCTGAAAAGTTGGATATCCCTTTTCAGTTCCATCAG
GTAGTTAGCAAATTGGAAAATCTTGATGTTGAAAAACTACGAGTTAAAACCGGGGAGGCG
TTGGCGATTAGTTCAGTTATGCAGTTGCACACTCTTCTTGCACATGATGATGAACCCCAA
AAGAAATCCCCTTTGGGTTTCAAGCATTTGAATGGCCTTCACTTGCAAAGGGCATTACTC
AACCAAAATACTTTAGGGGACTTGCTCGAAAAGGAAACAACTAATGTTTTTAGTCCGGGA
AATGAATCAGCATCTTCATCTCCGCTATCTCCAACTGCCCCAGCAAAGATTGACGGATTC
CTCTACGCGTTGTGGGGTTTGTCTCCAAAGGTCATGGTGGTCACAGAACAAGACTCGAAC
CACAATGGAACGACCCTTATGGAAAGGCTATCTGAGTCATTGTATTTTTACGCTGCATTA
TTCGATTGTCTTGAGTTCACACTACAGAGAACATCGTTAGAGCGATTAAAGGTCGAGAAA
ATGTTATTCGGCGAGGAGATCAAGAATATCGTAGCGTGTGAGGGAGTCGAGCGGAAGGAA
AGGCACGAAAAACTGGATAAGTGGTTTCAAAGATTCGATGGAGCCAGTTTCAGGAATGTG
CCTCTGAGTTATTATGCAATGTTGCAGGCAAGGAGATTGTTGCAGAGTTACAGTTGTGAA
GGATACAAGATTAAAGAAGAGAATGGTTGCGTGGTGATTTGCTGGCAAGATCGCGTTCTT
TTCTCAGTATCTGCTTGGAGATGTAGGAGGTGA

Peptide Sequence

PEP ID

XP_016500456.1
PEP Infomation

PREDICTED: scarecrow-like protein 3 [Nicotiana tabacum]
Sequence

MLQDDGSSSVTSSSPLQNFPMTSLSPSLNSPYHWLKELKSEERGLYLIHLLLTCANHVAA
GNLENANIALDQISQLASPKGDTMQRIASYFAEALADRILRSWPGIYKALHSTKLSIVSE
DILVKKMFFEYFPFLKVASLITNQAIIEAMEGEKMVHIVDLNASEPLQWRALLQDLRARP
EGPPHLRITGVHQQKEVLEQIAHVLTEEAEKLDIPFQFHQVVSKLENLDVEKLRVKTGEA
LAISSVMQLHTLLAHDDEPQKKSPLGFKHLNGLHLQRALLNQNTLGDLLEKETTNVFSPG
NESASSSPLSPTAPAKIDGFLYALWGLSPKVMVVTEQDSNHNGTTLMERLSESLYFYAAL
FDCLEFTLQRTSLERLKVEKMLFGEEIKNIVACEGVERKERHEKLDKWFQRFDGASFRNV
PLSYYAMLQARRLLQSYSCEGYKIKEENGCVVICWQDRVLFSVSAWRCRR

Transcript Sequence

Gene sequence data has not been registered.